Index

A

apply_threshold() (in module SilentInfarctionSegmentationFLAIR.segmentation)

C

check_3d() (in module SilentInfarctionSegmentationFLAIR.utils)

cliffs_delta() (in module SilentInfarctionSegmentationFLAIR.utils) connected_components() (in module SilentInfarctionSegmentationFLAIR.refinement)

D

diameter_filter() (in module SilentInfarctionSegmentationFLAIR.refinement)

DimensionError downsample_array() (in module SilentInfarctionSegmentationFLAIR.utils)

E

evaluate_region_wise() (in module SilentInfarctionSegmentationFLAIR.refinement)

evaluate_voxel_wise() (in module SilentInfarctionSegmentationFLAIR.segmentation) extend_lesions() (in module SilentInfarctionSegmentationFLAIR.refinement)

F

find_diameters() (in module SilentInfarctionSegmentationFLAIR.refinement)

G

gaussian_smooth_histogram() (in module SilentInfarctionSegmentationFLAIR.histograms) gaussian_transform() (in module SilentInfarctionSegmentationFLAIR.utils) get_array_from_image() (in module SilentInfarctionSegmentationFLAIR.utils) get_image_from_array() (in module SilentInfarctionSegmentationFLAIR.utils)

get_info() (in module SilentInfarctionSegmentationFLAIR.utils) get_mask_from_pve() (in module SilentInfarctionSegmentationFLAIR.segmentation) get_mask_from_segmentation() (in module SilentInfarctionSegmentationFLAIR.segmentation) get_paths_df() (in module SilentInfarctionSegmentationFLAIR.utils)

H

histogram_stats() (in module SilentInfarctionSegmentationFLAIR.histograms)

L

label_filter() (in module SilentInfarctionSegmentationFLAIR.refinement)

label_names() (in module SilentInfarctionSegmentationFLAIR.utils)

M

main() (in module SilentInfarctionSegmentationFLAIR.evaluate_test_set) (in module SilentInfarctionSegmentationFLAIR.flair_t1_sum) (in module SilentInfarctionSegmentationFLAIR.refinement_step) (in module SilentInfarctionSegmentationFLAIR.threshold) (in module SilentInfarctionSegmentationFLAIR.tuning_alpha_beta) (in module SilentInfarctionSegmentationFLAIR.tuning_gamma_rs)

mode_and_rhwhm() (in module SilentInfarctionSegmentationFLAIR.histograms) module SilentInfarctionSegmentationFLAIR.histograms SilentInfarctionSegmentationFLAIR.refinement SilentInfarctionSegmentationFLAIR.segmentation SilentInfarctionSegmentationFLAIR.utils

N

nearly_isotropic_kernel() (in module SilentInfarctionSegmentationFLAIR.refinement)

normalize() (in module SilentInfarctionSegmentationFLAIR.utils)

O

orient_image() (in module SilentInfarctionSegmentationFLAIR.utils)

P

plot_histogram() (in module SilentInfarctionSegmentationFLAIR.histograms) plot_image() (in module SilentInfarctionSegmentationFLAIR.utils)

plot_multiple_histograms() (in module SilentInfarctionSegmentationFLAIR.histograms) progress_bar() (in module SilentInfarctionSegmentationFLAIR.utils) pve_filter() (in module SilentInfarctionSegmentationFLAIR.refinement)

R

resample_to_reference() (in module SilentInfarctionSegmentationFLAIR.utils)

S

SilentInfarctionSegmentationFLAIR.histograms module SilentInfarctionSegmentationFLAIR.refinement module

SilentInfarctionSegmentationFLAIR.segmentation module SilentInfarctionSegmentationFLAIR.utils module surrounding_filter() (in module SilentInfarctionSegmentationFLAIR.refinement)

T

train_val_test_split() (in module SilentInfarctionSegmentationFLAIR.utils)